NEET-PG 2012 - Biochemistry Practice Questions

Q: What is the primary function of a primer in DNA replication?

Initiation of DNA replication. ***Initiation of DNA replication*** - DNA polymerase cannot synthesize new DNA strands de novo; it requires a pre-existing 3'-hydroxyl group to begin adding nucleotides. - The **primer**, a short RNA sequence, provides this necessary **3'-hydroxyl group**, allowing DNA polymerase to start synthesizing the new DNA strand. *Transcription* - This process involves synthesizing **RNA from a DNA template**, primarily carried out by **RNA polymerase**. - While primers are involved in DNA synthesis, they do not directly initiate the process of transcription. *Translation* - **Translation** is the process of synthesizing **proteins from mRNA templates** using ribosomes, tRNA, and amino acids. - This process is distinct from DNA synthesis and does not involve primers; its initiation involves start codons and ribosomal subunits. *Termination of DNA replication* - **Termination of DNA replication** occurs when replication forks meet or at specific termination sequences, often with the involvement of specialized proteins. - Primers are involved in the *start* of replication, not its conclusion.

Q: Acute intermittent porphyria is due to deficiency of?

Porphobilinogen deaminase. ***Porphobilinogen deaminase*** - **Acute intermittent porphyria (AIP)** results from a deficiency in **porphobilinogen deaminase** (also known as hydroxymethylbilane synthase). - This enzyme deficiency leads to the accumulation of **aminolevulinic acid (ALA)** and **porphobilinogen (PBG)**, which are neurotoxic and cause the characteristic symptoms of AIP. *Uroporphyrinogen III synthase* - A deficiency in **uroporphyrinogen III synthase** causes **congenital erythropoietic porphyria (Günther disease)**, which is characterized by severe photosensitivity and hemolytic anemia. - This enzyme defect leads to the accumulation of uroporphyrinogen I and coproporphyrinogen I, not the ALA and PBG associated with AIP. *Ferrochelatase* - Deficiency in **ferrochelatase** causes **erythropoietic protoporphyria (EPP)**, which presents with photosensitivity and chronic liver disease due to the accumulation of **protoporphyrin**. - This condition does not cause the acute neurological attacks seen in AIP. *ALA synthase* - **ALA synthase** is the **rate-limiting enzyme** in heme synthesis; while its activity is crucial, a congenital *deficiency* is not the cause of AIP. - Instead, the *upregulation* of ALA synthase activity in AIP (due to the PBG deaminase block) contributes to the accumulation of ALA and PBG.

Q: What is the primary metal ion found in myoglobin?

Iron. ***Iron*** - **Iron** is the central metal ion in the **heme group** of myoglobin. - It is responsible for **binding oxygen** reversibly, which is myoglobin's primary function in muscle tissue. *Copper* - **Copper** is a component of several enzymes, such as **cytochrome c oxidase** and **superoxide dismutase**, but not myoglobin. - It plays a role in **electron transport** and connective tissue formation. *Selenium* - **Selenium** is an essential trace element that functions as a component of **glutathione peroxidase**, an antioxidant enzyme. - It is not found in the structure of myoglobin. *Zinc* - **Zinc** is a critical component of many enzymes, including **carbonic anhydrase** and **DNA polymerase**. - It is involved in **immune function** and wound healing, but not in oxygen transport by myoglobin.

Q: Which of the following is a tripeptide?

Glutathione. ***Glutathione*** - **Glutathione** is a tripeptide composed of three amino acids: **glutamate**, **cysteine**, and **glycine**. - It plays a crucial role as an **antioxidant** in the body, protecting cells from damage by **free radicals**. *Angiotensin* - **Angiotensin** is a peptide hormone that causes **vasoconstriction** and an increase in **blood pressure**. - It is an **oligopeptide** (typically 8-10 amino acids) rather than a tripeptide. *Glucagon* - **Glucagon** is a peptide hormone produced by the **alpha cells** of the pancreas that raises **blood glucose levels**. - It is a **29-amino acid** polypeptide, much larger than a tripeptide. *Oxytocin* - **Oxytocin** is a hormone involved in social bonding and sexual reproduction, best known for its role in **childbirth** and **lactation**. - It is a **nonapeptide**, meaning it consists of nine amino acids.

Q: Which of the following is the shortest peptide?

Angiotensin III. ***Angiotensin III*** - **Angiotensin III** is a **heptapeptide**, meaning it consists of **7 amino acids**. - It is formed by the removal of the N-terminal aspartate from Angiotensin II (8 amino acids), making it the shortest peptide among the options. - It has similar but weaker actions compared to Angiotensin II in regulating blood pressure and aldosterone secretion. *Oxytocin* - **Oxytocin** is a **nonapeptide**, composed of **9 amino acids**. - It plays a role in uterine contractions during labor and milk ejection during lactation. *Vasopressin* - **Vasopressin**, also known as **antidiuretic hormone (ADH)**, is a **nonapeptide** (**9 amino acids**). - Its primary functions are water reabsorption in the kidneys and vasoconstriction. *Angiotensin II* - **Angiotensin II** is an **octapeptide**, containing **8 amino acids**. - It is a potent vasoconstrictor and stimulates aldosterone secretion, playing a key role in blood pressure regulation.

Q: Where does omega oxidation of fatty acids occur?

Endoplasmic Reticulum. ***Endoplasmic Reticulum*** - **Omega oxidation** of fatty acids occurs in the **endoplasmic reticulum (microsomes)** of liver and kidney cells. - This pathway involves **hydroxylation of the terminal omega carbon** by **cytochrome P450 enzymes** located in the smooth ER. - The omega carbon is then oxidized to a **carboxyl group**, forming a **dicarboxylic acid**. - This is a **minor pathway** that becomes important when **beta-oxidation is impaired** or for metabolism of **medium-chain fatty acids**. *Cytosol* - The cytosol is involved in **fatty acid synthesis**, not omega oxidation. - While some later steps of fatty acid metabolism occur in the cytosol, the initial hydroxylation step of omega oxidation requires ER-localized cytochrome P450 enzymes. *Mitochondria* - **Mitochondria** are the primary site for **beta-oxidation** of fatty acids, not omega oxidation. - Beta-oxidation sequentially removes **two-carbon units from the carboxyl end**, which is distinct from omega oxidation. - The dicarboxylic acids produced by omega oxidation may subsequently undergo beta-oxidation in mitochondria. *None of the options* - This option is incorrect because the endoplasmic reticulum is the correct cellular location for omega oxidation. - The ER contains the necessary cytochrome P450 enzymes for the hydroxylation reaction that initiates this pathway.

Q: Which of the following is not affected in Abetalipoproteinemia ?

HDL. ***HDL*** - **Abetalipoproteinemia** is caused by a defect in the **microsomal triglyceride transfer protein (MTP)**, which is essential for the assembly and secretion of **chylomicrons**, **VLDL**, and subsequently **LDL** and **IDL**. - **HDL synthesis** and secretion occur independently of MTP, as nascent HDL particles are formed in the plasma from lipids and apolipoproteins (primarily apoA-I) released from other lipoproteins and cells. *LDL* - **LDL** is critically affected in abetalipoproteinemia because it is a metabolic product of **VLDL**. - Since **VLDL** production is severely impaired due to the MTP defect, there is a profound deficiency of **LDL** in the plasma. *VLDL* - **VLDL** production is severely impaired in abetalipoproteinemia because **microsomal triglyceride transfer protein (MTP)** is required for its assembly and secretion from the liver. - The inability to load triglycerides onto apoB leads to very low or absent plasma **VLDL** levels. *IDL* - **IDL** is an intermediate lipoprotein in the metabolism of **VLDL** to **LDL**. - Given that both **VLDL** and **LDL** are severely deficient in abetalipoproteinemia, **IDL** levels are also consequently very low or absent.

Q: What is the metabolic abnormality associated with Zellweger syndrome?

Accumulation of very long-chain fatty acids. ***Accumulation of very long-chain fatty acids*** - **Zellweger syndrome** is a peroxisomal biogenesis disorder, meaning that peroxisomes, which are responsible for the **beta-oxidation** of very long-chain fatty acids (VLCFAs), are absent or dysfunctional. - The inability to break down **VLCFAs** leads to their accumulation in various tissues, causing significant neurological and systemic dysfunction. *Accumulation of long-chain fatty acids* - While peroxisomes can contribute to the metabolism of some **long-chain fatty acids (LCFAs)**, their primary role in this context is with **VLCFAs**. - **Mitochondria** are the main organelles responsible for the beta-oxidation of most LCFAs. *Accumulation of short-chain fatty acids* - **Short-chain fatty acids (SCFAs)** are primarily produced by gut bacteria and are metabolized in the mitochondria and other cellular compartments. - Their accumulation is not characteristic of **Zellweger syndrome**. *Accumulation of medium-chain fatty acids* - **Medium-chain fatty acids (MCFAs)** are primarily metabolized in the **mitochondria** and do not typically accumulate in Zellweger syndrome. - Disorders affecting MCFA metabolism usually point to different enzyme deficiencies, such as **MCAD deficiency.**

Q: Which of the following substances is not derived from tyrosine?

Nicotinic acid. ***Nicotinic acid*** - **Nicotinic acid** (niacin, vitamin B3) is synthesized from **tryptophan** in the body, not tyrosine. - It plays a crucial role in metabolism as a precursor for NAD+ and NADH, which are involved in various enzymatic reactions. *Thyroxine* - **Thyroxine** (T4), a thyroid hormone, is derived from the amino acid **tyrosine**. - **Iodine** is incorporated into tyrosine residues on thyroglobulin to form monoiodotyrosine (MIT) and diiodotyrosine (DIT), which then couple to form T4 (and T3). *Melanin* - **Melanin**, the pigment responsible for skin, hair, and eye color, is synthesized from **tyrosine** through a pathway involving the enzyme **tyrosinase**. - This process involves the hydroxylation of tyrosine to 3,4-dihydroxyphenylalanine (DOPA) and subsequent oxidation reactions. *Dopamine* - **Dopamine**, an important neurotransmitter, is synthesized from **tyrosine** in a two-step process in the brain and adrenal medulla. - Tyrosine is first hydroxylated to DOPA by **tyrosine hydroxylase**, and then DOPA is decarboxylated to dopamine by DOPA decarboxylase.

Q: Which amino acid is used by the liver in the urea cycle?

Aspartate. ***Aspartate*** - **Aspartate** provides the second nitrogen atom to the urea cycle, directly contributing to the formation of **argininosuccinate** through condensation with citrulline. - It is crucial for the efficient removal of **ammonia** in the form of urea. *Glutamine* - **Glutamine** transports ammonia from peripheral tissues to the liver and kidneys, but it is typically deamidated to **glutamate** before its nitrogen can enter the urea cycle. - While it's a major ammonia carrier, it's not directly incorporated into urea as an intact amino acid. *Glutamate* - **Glutamate** can donate its amino group to form **aspartate** (via transamination with oxaloacetate) or release ammonia directly (via glutamate dehydrogenase), both of which then enter the urea cycle. - However, glutamate itself is not directly incorporated into the urea molecule in the same way aspartate is. *Ornithine* - **Ornithine** is an amino acid that participates in the urea cycle as a carrier molecule, being regenerated at the end of each cycle. - While essential for the cycle to function, it is not "used" in the sense of being consumed or providing nitrogen for urea formation - rather it acts as a catalytic intermediate that is recycled.

Question 1

What is the primary function of a primer in DNA replication?

Accepted Answer

Initiation of DNA replication

Answer

Transcription

Answer

Translation

Answer

Termination of DNA replication

Question 2

Acute intermittent porphyria is due to deficiency of?

Accepted Answer

Porphobilinogen deaminase

Answer

Uroporphyrinogen III synthase

Answer

Ferrochelatase

Answer

ALA synthase

Question 3

What is the primary metal ion found in myoglobin?

Accepted Answer

Iron

Answer

Copper

Answer

Selenium

Answer

Zinc

Question 4

Which of the following is a tripeptide?

Accepted Answer

Glutathione

Answer

Angiotensin

Answer

Glucagon

Answer

Oxytocin

Question 5

Which of the following is the shortest peptide?

Accepted Answer

Angiotensin III

Answer

Oxytocin

Answer

Vasopressin

Answer

Angiotensin II

Question 6

Where does omega oxidation of fatty acids occur?

Accepted Answer

Endoplasmic Reticulum

Answer

Cytosol

Answer

Mitochondria

Answer

None of the options

Question 7

Which of the following is not affected in Abetalipoproteinemia ?

Accepted Answer

HDL

Answer

LDL

Answer

IDL

Answer

VLDL

Question 8

What is the metabolic abnormality associated with Zellweger syndrome?

Accepted Answer

Accumulation of very long-chain fatty acids

Answer

Accumulation of long-chain fatty acids

Answer

Accumulation of short-chain fatty acids

Answer

Accumulation of medium-chain fatty acids

Question 9

Which of the following substances is not derived from tyrosine?

Accepted Answer

Nicotinic acid

Answer

Thyroxine

Answer

Melanin

Answer

Dopamine

Question 10

Which amino acid is used by the liver in the urea cycle?

Accepted Answer

Aspartate

Answer

Glutamine

Answer

Glutamate

Answer

Ornithine

NEET-PG 2012 — Biochemistry