Amino Acid Metabolism Practice Questions

Q: Transamination of Aspartate forms which compound?

Oxaloacetate. ***Oxaloacetate*** - **Aspartate** is transaminated by **aspartate aminotransferase (AST)**, transferring its alpha-amino group to **alpha-ketoglutarate**. - This reaction converts aspartate into its corresponding alpha-keto acid, which is **oxaloacetate**. *Pyruvate* - **Pyruvate** is the alpha-keto acid corresponding to the amino acid **alanine**. - Transamination of **alanine** yields **pyruvate**, not aspartate. *Acetyl-CoA* - **Acetyl-CoA** is not a direct product of amino acid transamination; it is formed from **pyruvate** or fatty acid oxidation. - It functions as a key metabolic intermediate in energy production and biosynthesis. *Alanine* - **Alanine** is an amino acid, and therefore a reactant in transamination reactions to form pyruvate, rather than a product of aspartate transamination. - While it can be formed from pyruvate via transamination, it is not formed from aspartate.

Q: Which enzyme catalyzes oxidative deamination?

Glutamate dehydrogenase. ***Glutamate dehydrogenase*** - This enzyme catalyzes the conversion of **glutamate** to **α-ketoglutarate** and ammonia (NH₃), which is an oxidative deamination reaction. - It utilizes **NAD⁺ or NADP⁺** as a coenzyme to remove hydrogen atoms during the oxidation process. - Plays a crucial role in both **amino acid catabolism** and anabolism. *Glutaminase* - This enzyme hydrolyzes **glutamine** to glutamate and ammonia, which is a **hydrolytic deamidation** reaction, not an oxidative deamination. - It does not involve the oxidation of the substrate or require NAD⁺/NADP⁺ as cofactors. *Glutamine synthase* - This enzyme synthesizes **glutamine** from glutamate and ammonia, using ATP, which is a **biosynthetic** reaction, not a catabolic deamination. - It is involved in **ammonia detoxification** and amino acid synthesis, functioning in the opposite direction of deamination. *None of the options* - This option is incorrect because **glutamate dehydrogenase** is a valid correct answer. - Glutamate dehydrogenase is the primary enzyme responsible for oxidative deamination in human metabolism.

Q: Which enzyme is deficient in Isovaleric acidemia?

Isovaleryl CoA dehydrogenase. ***Isovaleryl CoA dehydrogenase*** - **Isovaleric acidemia** is an **autosomal recessive** metabolic disorder caused by a deficiency in the enzyme **isovaleryl-CoA dehydrogenase** - This enzyme is crucial for the metabolism of **leucine**, a branched-chain amino acid, leading to the accumulation of toxic byproducts like **isovaleryl-CoA** and **isovaleric acid** - Characteristic **sweaty feet odor** due to isovaleric acid accumulation *Phenylalanine hydroxylase* - A deficiency in **phenylalanine hydroxylase** is responsible for **phenylketonuria (PKU)**, a different metabolic disorder involving the metabolism of **phenylalanine** - This enzyme converts **phenylalanine to tyrosine**, and its deficiency leads to the accumulation of phenylalanine and its metabolites, causing neurological damage if untreated *Arginase* - A deficiency in **arginase** causes **argininemia (hyperargininemia)**, which is a disorder of the **urea cycle** - This enzyme converts **arginine into urea and ornithine**, and its deficiency leads to the buildup of arginine and ammonia in the blood, causing neurological symptoms and developmental delay *Methylmalonyl CoA mutase* - A deficiency in **methylmalonyl CoA mutase** causes **methylmalonic acidemia**, another organic acidemia distinct from isovaleric acidemia - This disorder involves **propionate metabolism** and can present with metabolic acidosis, but affects a different metabolic pathway than leucine catabolism

Q: Taurine is biosynthesized from which amino acid?

Cysteine. ***Cysteine*** - **Taurine** is primarily synthesized from the amino acid **cysteine** through a pathway involving **cysteine sulfinic acid** and **hypotaurine**. - This pathway utilizes enzymes like **cysteine dioxygenase** and **cysteine sulfinic acid decarboxylase**. - The biosynthetic pathway: Cysteine → Cysteine sulfinic acid → Hypotaurine → Taurine. *Arginine* - **Arginine** is a precursor for **nitric oxide**, **urea**, and **creatine**, not taurine. - It is involved in various metabolic pathways, including the **urea cycle** and protein synthesis. *Valine* - **Valine** is a **branched-chain amino acid (BCAA)** involved in protein synthesis and energy production. - It is not a direct precursor for taurine biosynthesis. *Leucine* - **Leucine** is also a **branched-chain amino acid (BCAA)** crucial for protein synthesis and muscle metabolism. - It does not participate in the synthesis of taurine.

Q: Transamination of Alanine results in formation of ?

Pyruvate. **Pyruvate** ✓ - **Transamination** involves the transfer of an amino group from an amino acid to an α-ketoglutarate (catalyzed by aminotransferases). - When **alanine** undergoes transamination via **ALT (alanine aminotransferase)**, its amino group is transferred to α-ketoglutarate, forming glutamate, while alanine is converted to its corresponding α-keto acid, which is **pyruvate**. - Reaction: Alanine + α-Ketoglutarate ⇄ Pyruvate + Glutamate *Oxaloacetate* - **Oxaloacetate** is the α-keto acid formed from the transamination of **aspartate** (via AST/GOT). - It is a key intermediate in the **citric acid cycle** and gluconeogenesis, not a product of alanine transamination. *Aspartate* - **Aspartate** is an amino acid, not an α-keto acid. - It can be formed from oxaloacetate via transamination (reverse reaction), and is involved in the **urea cycle** and nucleotide synthesis. *Arginine* - **Arginine** is a semi-essential amino acid, not an α-keto acid or a product of alanine transamination. - It plays roles in **protein synthesis**, the urea cycle, and nitric oxide production.

Q: Ochronosis is due to accumulation of ?

Homogentisic acid. ***Homogentisic acid*** - Ochronosis is a condition caused by the excessive accumulation of **homogentisic acid** in connective tissues. - This accumulation occurs due to a deficiency of the enzyme **homogentisate 1,2-dioxygenase** (HGD), which is responsible for breaking down homogentisic acid in the tyrosine degradation pathway. *Phenylpyruvate* - **Phenylpyruvate** accumulates in **phenylketonuria (PKU)**, a different metabolic disorder where there's a deficiency in phenylalanine hydroxylase. - PKU leads to intellectual disability and other neurological problems, not the characteristic pigmentation and arthritis of ochronosis. *Xanthurenate* - **Xanthurenate** is an abnormal metabolite of tryptophan metabolism that can accumulate in **vitamin B6 deficiency**. - Its accumulation is associated with increased urinary excretion and is not directly implicated in the pathology of ochronosis. *Glyoxylate* - **Glyoxylate** is involved in various metabolic pathways, and its accumulation (or accumulation of its metabolic products like oxalate) is associated with **primary hyperoxaluria**. - Primary hyperoxaluria leads to kidney stones and kidney failure, a condition distinct from ochronosis.

Q: Hydrolysis occurs at which step of urea cycle ?

Cleavage of arginine. ***Cleavage of arginine*** - The final step in the urea cycle, where **arginine** is hydrolyzed by the enzyme **arginase** to form **urea** and **ornithine**. - This reaction involves the addition of a **water molecule** across the guanidino group to release urea. *Formation of argininosuccinate* - This step involves the condensation of **citrulline** and **aspartate**, catalyzed by **argininosuccinate synthetase**. - It is an **ATP-dependent** reaction, not a hydrolysis. *Formation of citrulline* - Occurs when **carbamoyl phosphate** condenses with **ornithine**, catalyzed by **ornithine transcarbamylase**. - This reaction involves the removal of a phosphate group, not the addition of water. *Formation of ornithine* - **Ornithine** is a substrate for the formation of citrulline and is also regenerated at the end of the cycle from arginine. - Its formation from arginine is a **hydrolysis** reaction, but simply stating "formation of ornithine" is less specific than "cleavage of arginine," which directly describes the hydrolytic event.

Q: Which of the following substances is not derived from tyrosine?

Nicotinic acid. ***Nicotinic acid*** - **Nicotinic acid** (niacin, vitamin B3) is synthesized from **tryptophan** in the body, not tyrosine. - It plays a crucial role in metabolism as a precursor for NAD+ and NADH, which are involved in various enzymatic reactions. *Thyroxine* - **Thyroxine** (T4), a thyroid hormone, is derived from the amino acid **tyrosine**. - **Iodine** is incorporated into tyrosine residues on thyroglobulin to form monoiodotyrosine (MIT) and diiodotyrosine (DIT), which then couple to form T4 (and T3). *Melanin* - **Melanin**, the pigment responsible for skin, hair, and eye color, is synthesized from **tyrosine** through a pathway involving the enzyme **tyrosinase**. - This process involves the hydroxylation of tyrosine to 3,4-dihydroxyphenylalanine (DOPA) and subsequent oxidation reactions. *Dopamine* - **Dopamine**, an important neurotransmitter, is synthesized from **tyrosine** in a two-step process in the brain and adrenal medulla. - Tyrosine is first hydroxylated to DOPA by **tyrosine hydroxylase**, and then DOPA is decarboxylated to dopamine by DOPA decarboxylase.

Q: Which amino acid is used by the liver in the urea cycle?

Aspartate. ***Aspartate*** - **Aspartate** provides the second nitrogen atom to the urea cycle, directly contributing to the formation of **argininosuccinate** through condensation with citrulline. - It is crucial for the efficient removal of **ammonia** in the form of urea. *Glutamine* - **Glutamine** transports ammonia from peripheral tissues to the liver and kidneys, but it is typically deamidated to **glutamate** before its nitrogen can enter the urea cycle. - While it's a major ammonia carrier, it's not directly incorporated into urea as an intact amino acid. *Glutamate* - **Glutamate** can donate its amino group to form **aspartate** (via transamination with oxaloacetate) or release ammonia directly (via glutamate dehydrogenase), both of which then enter the urea cycle. - However, glutamate itself is not directly incorporated into the urea molecule in the same way aspartate is. *Ornithine* - **Ornithine** is an amino acid that participates in the urea cycle as a carrier molecule, being regenerated at the end of each cycle. - While essential for the cycle to function, it is not "used" in the sense of being consumed or providing nitrogen for urea formation - rather it acts as a catalytic intermediate that is recycled.

Q: What is the primary biochemical defect in alkaptonuria?

Deficiency of homogentisate 1,2-dioxygenase. ***Deficiency of homogentisate 1,2-dioxygenase*** - **Alkaptonuria** is an autosomal recessive disorder caused by the deficiency of **homogentisate 1,2-dioxygenase**, an enzyme in the **tyrosine degradation pathway**. - This deficiency leads to the accumulation of **homogentisic acid** in the body, which is excreted in urine and deposited in connective tissues. *Urine turns black immediately upon voiding* - While urine in alkaptonuria does **turn black**, it typically darkens upon **standing** and exposure to air, not immediately upon voiding. - The darkening is due to the oxidation of accumulated **homogentisic acid**. *FeCl3 test is negative* - The **ferric chloride (FeCl3) test** typically yields a **positive result** (transient green color) in the presence of homogentisic acid in the urine. - Therefore, a negative result would argue against a diagnosis of alkaptonuria. *Benedict's test is diagnostic for alkaptonuria* - **Benedict's test** is used to detect reducing sugars like glucose in urine and would not be used to diagnose alkaptonuria. - A positive Benedict's test in alkaptonuria is due to the reducing properties of homogentisic acid, but it is not specific or diagnostic.

Question 1

Transamination of Aspartate forms which compound?

Accepted Answer

Oxaloacetate

Answer

Pyruvate

Answer

Acetyl-CoA

Answer

Alanine

Question 2

Which enzyme catalyzes oxidative deamination?

Accepted Answer

Glutamate dehydrogenase

Answer

Glutaminase

Answer

Glutamine synthase

Answer

None of the options

Question 3

Which enzyme is deficient in Isovaleric acidemia?

Accepted Answer

Isovaleryl CoA dehydrogenase

Answer

Phenylalanine hydroxylase

Answer

Arginase

Answer

Methylmalonyl CoA mutase

Question 4

Taurine is biosynthesized from which amino acid?

Accepted Answer

Cysteine

Answer

Valine

Answer

Arginine

Answer

Leucine

Question 5

Transamination of Alanine results in formation of ?

Accepted Answer

Pyruvate

Answer

Oxaloacetate

Answer

Aspartate

Answer

Arginine

Question 6

Ochronosis is due to accumulation of ?

Accepted Answer

Homogentisic acid

Answer

Phenylpyruvate

Answer

Xanthurenate

Answer

Glyoxylate

Question 7

Hydrolysis occurs at which step of urea cycle ?

Accepted Answer

Cleavage of arginine

Answer

Formation of ornithine

Answer

Formation of argininosuccinate

Answer

Formation of citrulline

Question 8

Which of the following substances is not derived from tyrosine?

Accepted Answer

Nicotinic acid

Answer

Thyroxine

Answer

Melanin

Answer

Dopamine

Question 9

Which amino acid is used by the liver in the urea cycle?

Accepted Answer

Aspartate

Answer

Glutamine

Answer

Glutamate

Answer

Ornithine

Question 10

What is the primary biochemical defect in alkaptonuria?

Accepted Answer

Deficiency of homogentisate 1,2-dioxygenase

Answer

FeCl3 test is negative

Answer

Urine turns black immediately upon voiding

Answer

Benedict's test is diagnostic for alkaptonuria

Amino Acid Metabolism — MCQs

Amino Acid Metabolism — MCQs

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